STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_062070Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
CUMW_214370
Uncharacterized protein.
  
     0.518
CUMW_214360
HMA domain-containing protein.
  
     0.510
CUMW_006320
Uncharacterized protein.
  
     0.499
CUMW_277740
Uncharacterized protein.
  
     0.498
CUMW_181040
DUF4408 domain-containing protein.
  
     0.495
CUMW_197140
Uncharacterized protein.
  
     0.493
CUMW_034420
Uncharacterized protein.
  
     0.491
CUMW_251940
Uncharacterized protein.
  
     0.491
CUMW_060310
Uncharacterized protein.
  
     0.490
CUMW_235850
Apple domain-containing protein.
  
     0.482
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.