STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_060150GRAM domain-containing protein. (273 aa)    
Predicted Functional Partners:
CUMW_009050
Uncharacterized protein.
    
 
 0.646
CUMW_191920
C2H2-type domain-containing protein.
  
     0.483
CUMW_038190
Uncharacterized protein.
  
     0.471
CUMW_257250
Uncharacterized protein.
  
     0.467
CUMW_184800
CRM domain-containing protein.
  
     0.451
CUMW_041140
Uncharacterized protein.
  
     0.449
CUMW_009250
X8 domain-containing protein.
  
     0.446
CUMW_071950
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
  
     0.435
CUMW_117620
Uncharacterized protein.
  
     0.433
CUMW_045940
Uncharacterized protein.
  
     0.423
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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