CUMW_068340 protein (Citrus unshiu) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUMW_068340

Thioredoxin; Belongs to the thioredoxin family. (119 aa)

Predicted Functional Partners:

CUMW_061560

0.922

CUMW_014960

0.902

CUMW_097180

0.902

CUMW_004970

0.792

CUMW_004960

0.792

CUMW_167720

0.733

CUMW_194560

0.724

CUMW_230680

0.695

CUMW_235330

0.686

CUMW_240010

0.673

Your Current Organism:

Citrus unshiu

NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUMW_004960	CUMW_014960	A0A2H5MZ75	A0A2H5N617	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.765
CUMW_004960	CUMW_061560	A0A2H5MZ75	A0A2H5NNF4	Thioredoxin domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.708
CUMW_004960	CUMW_068340	A0A2H5MZ75	A0A2H5NR70	Thioredoxin domain-containing protein.	Thioredoxin; Belongs to the thioredoxin family.	0.792
CUMW_004960	CUMW_097180	A0A2H5MZ75	A0A2H5P2F7	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.765
CUMW_004960	CUMW_167720	A0A2H5MZ75	A0A2H5PU72	Thioredoxin domain-containing protein.	Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.	0.495
CUMW_004960	CUMW_194560	A0A2H5MZ75	A0A2H5Q485	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.931
CUMW_004960	CUMW_230680	A0A2H5MZ75	A0A2H5QHG6	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.781
CUMW_004960	CUMW_235330	A0A2H5MZ75	A0A2H5QJ73	Thioredoxin domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione.	0.781
CUMW_004960	CUMW_240010	A0A2H5MZ75	A0A2H5QKZ9	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.997
CUMW_004970	CUMW_014960	A0A2H5MY93	A0A2H5N617	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.765
CUMW_004970	CUMW_061560	A0A2H5MY93	A0A2H5NNF4	Thioredoxin domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.708
CUMW_004970	CUMW_068340	A0A2H5MY93	A0A2H5NR70	Thioredoxin domain-containing protein.	Thioredoxin; Belongs to the thioredoxin family.	0.792
CUMW_004970	CUMW_097180	A0A2H5MY93	A0A2H5P2F7	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.765
CUMW_004970	CUMW_167720	A0A2H5MY93	A0A2H5PU72	Thioredoxin domain-containing protein.	Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.	0.495
CUMW_004970	CUMW_194560	A0A2H5MY93	A0A2H5Q485	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.931
CUMW_004970	CUMW_230680	A0A2H5MY93	A0A2H5QHG6	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.781
CUMW_004970	CUMW_235330	A0A2H5MY93	A0A2H5QJ73	Thioredoxin domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione.	0.781
CUMW_004970	CUMW_240010	A0A2H5MY93	A0A2H5QKZ9	Thioredoxin domain-containing protein.	Thioredoxin reductase.	0.997
CUMW_014960	CUMW_004960	A0A2H5N617	A0A2H5MZ75	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.765
CUMW_014960	CUMW_004970	A0A2H5N617	A0A2H5MY93	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.765