CUMW_070160 protein (Citrus unshiu) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUMW_070160

Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (255 aa)

Predicted Functional Partners:

CUMW_225360

0.936

CUMW_020680

0.599

CUMW_006200

0.526

CUMW_010930

0.476

CUMW_010920

0.476

CUMW_027670

0.472

CUMW_023860

0.457

CUMW_227990

0.457

CUMW_023850

0.444

CUMW_119640

0.433

Your Current Organism:

Citrus unshiu

NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUMW_006200	CUMW_020680	A0A2H5MYW3	A0A2H5N8D9	Pyr_redox_2 domain-containing protein.	Coilin_N domain-containing protein.	0.547
CUMW_006200	CUMW_070160	A0A2H5MYW3	A0A2H5NRS2	Pyr_redox_2 domain-containing protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.526
CUMW_010920	CUMW_010930	A0A2H5N3G3	A0A2H5N260	Uncharacterized protein.	Uncharacterized protein.	0.886
CUMW_010920	CUMW_020680	A0A2H5N3G3	A0A2H5N8D9	Uncharacterized protein.	Coilin_N domain-containing protein.	0.467
CUMW_010920	CUMW_070160	A0A2H5N3G3	A0A2H5NRS2	Uncharacterized protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.476
CUMW_010930	CUMW_010920	A0A2H5N260	A0A2H5N3G3	Uncharacterized protein.	Uncharacterized protein.	0.886
CUMW_010930	CUMW_020680	A0A2H5N260	A0A2H5N8D9	Uncharacterized protein.	Coilin_N domain-containing protein.	0.467
CUMW_010930	CUMW_070160	A0A2H5N260	A0A2H5NRS2	Uncharacterized protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.476
CUMW_020680	CUMW_006200	A0A2H5N8D9	A0A2H5MYW3	Coilin_N domain-containing protein.	Pyr_redox_2 domain-containing protein.	0.547
CUMW_020680	CUMW_010920	A0A2H5N8D9	A0A2H5N3G3	Coilin_N domain-containing protein.	Uncharacterized protein.	0.467
CUMW_020680	CUMW_010930	A0A2H5N8D9	A0A2H5N260	Coilin_N domain-containing protein.	Uncharacterized protein.	0.467
CUMW_020680	CUMW_070160	A0A2H5N8D9	A0A2H5NRS2	Coilin_N domain-containing protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.599
CUMW_023850	CUMW_070160	A0A2H5N8Z0	A0A2H5NRS2	NAC domain-containing protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.444
CUMW_023850	CUMW_225360	A0A2H5N8Z0	A0A2H5QFP3	NAC domain-containing protein.	Uncharacterized protein.	0.951
CUMW_023860	CUMW_070160	A0A2H5NAN1	A0A2H5NRS2	NAC domain-containing protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.457
CUMW_023860	CUMW_225360	A0A2H5NAN1	A0A2H5QFP3	NAC domain-containing protein.	Uncharacterized protein.	0.951
CUMW_027670	CUMW_070160	A0A2H5NAM8	A0A2H5NRS2	BHLH domain-containing protein.	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	0.472
CUMW_070160	CUMW_006200	A0A2H5NRS2	A0A2H5MYW3	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	Pyr_redox_2 domain-containing protein.	0.526
CUMW_070160	CUMW_010920	A0A2H5NRS2	A0A2H5N3G3	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	Uncharacterized protein.	0.476
CUMW_070160	CUMW_010930	A0A2H5NRS2	A0A2H5N260	Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.	Uncharacterized protein.	0.476

page 1 of 2

Server load: low (28%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About