STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_078200Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (182 aa)    
Predicted Functional Partners:
CUMW_270070
Uncharacterized protein.
   
 0.886
CUMW_225830
Phosphoribulokinase.
   
 0.875
CUMW_174870
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.859
CUMW_026990
RuBisCO_small domain-containing protein.
  
  
 
0.840
CUMW_066960
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.837
CUMW_016690
Phosphoglycolate phosphatase.
   
 
 0.831
CUMW_272320
Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
  
  
 
0.827
CUMW_206120
Uncharacterized protein.
   
 
 0.755
CUMW_274940
Uncharacterized protein.
     
 0.626
CUMW_238440
Uncharacterized protein.
     
 0.626
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.