STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_080880Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
CUMW_062000
CHZ domain-containing protein.
    
 0.968
CUMW_110360
NFACT-R_1 domain-containing protein.
    
 0.968
CUMW_134190
Uncharacterized protein.
     
 0.815
CUMW_108610
F-box domain-containing protein.
  
  
  0.743
CUMW_045740
Uncharacterized protein.
    
 0.715
CUMW_044160
Uncharacterized protein.
     
 0.686
CUMW_157360
Sec8_exocyst domain-containing protein.
     
 0.672
CUMW_157370
Sec8_exocyst domain-containing protein.
     
 0.672
CUMW_078410
DDT domain-containing protein.
   
 
 0.666
CUMW_078400
DDT domain-containing protein.
   
 
 0.666
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.