STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_081730Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
CUMW_088920
Uncharacterized protein.
   
   0.859
CUMW_151870
NUC153 domain-containing protein.
   
    0.564
CUMW_064580
HIT-type domain-containing protein.
   
    0.477
CUMW_086010
Uncharacterized protein.
   
    0.473
CUMW_183080
Uncharacterized protein.
      
 0.470
CUMW_088060
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
    0.452
CUMW_175750
Uncharacterized protein.
   
    0.450
CUMW_057610
Uncharacterized protein.
   
  
 0.449
CUMW_286390
WD_REPEATS_REGION domain-containing protein.
    
   0.446
CUMW_013320
WD_REPEATS_REGION domain-containing protein.
    
   0.446
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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