STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_091890AAA domain-containing protein. (480 aa)    
Predicted Functional Partners:
CUMW_046560
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.622
CUMW_002390
Uncharacterized protein.
  
 
 0.572
CUMW_201300
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.474
CUMW_061600
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.471
CUMW_049020
Uncharacterized protein.
  
  
 0.466
CUMW_103400
Uncharacterized protein.
  
   0.457
CUMW_215570
Uncharacterized protein.
  
   0.457
CUMW_229870
Prohibitin.
   
 0.443
CUMW_023020
PHB domain-containing protein.
   
 0.441
CUMW_041120
PHB domain-containing protein.
   
 0.441
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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