STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_096850PHB domain-containing protein. (286 aa)    
Predicted Functional Partners:
CUMW_090330
AAA domain-containing protein.
   
 0.729
CUMW_180950
AAA domain-containing protein.
   
 0.729
CUMW_092860
Uncharacterized protein.
    
 0.669
CUMW_173760
Uncharacterized protein.
    
 0.669
CUMW_070280
FYVE-type domain-containing protein.
    
  0.619
CUMW_229870
Prohibitin.
   
 
 0.614
CUMW_011800
Uncharacterized protein.
    
  0.613
CUMW_089810
Uncharacterized protein.
    
  0.588
CUMW_069410
MCU domain-containing protein.
     
 0.554
CUMW_072200
MCU domain-containing protein.
     
 0.554
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.