STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_101640Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (407 aa)    
Predicted Functional Partners:
CUMW_002040
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.533
CUMW_118390
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.532
CUMW_020370
S-adenosylmethionine decarboxylase proenzyme.
      
 0.483
CUMW_257280
Uncharacterized protein.
      
 0.477
CUMW_013080
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.458
CUMW_045360
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.458
CUMW_071270
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.458
CUMW_125410
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.458
CUMW_160680
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.458
CUMW_038870
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 
 0.425
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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