STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_111020Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
CUMW_051560
Uncharacterized protein.
   
 0.979
CUMW_273290
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.976
CUMW_003820
Uncharacterized protein.
   
 0.956
CUMW_034720
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.953
CUMW_088340
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.953
CUMW_164600
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.950
CUMW_092830
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.949
CUMW_019130
Uncharacterized protein.
   
 0.948
CUMW_055780
Uncharacterized protein.
   
 0.948
CUMW_046950
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 0.946
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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