STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_111450Uncharacterized protein. (708 aa)    
Predicted Functional Partners:
CUMW_185530
Semialdhyde_dh domain-containing protein.
  
 
 0.983
CUMW_230440
Uncharacterized protein.
 
 0.983
CUMW_087120
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
 
 0.981
CUMW_059840
Uncharacterized protein.
  
 
 0.975
CUMW_121530
AA_kinase domain-containing protein.
   
 0.969
CUMW_140480
Uncharacterized protein.
   
 0.969
CUMW_131270
Uncharacterized protein.
  
 0.965
CUMW_082860
AA_kinase domain-containing protein.
  
 
 0.963
CUMW_124090
N-acetyltransferase domain-containing protein.
  
 
 0.963
CUMW_218850
Aminotran_1_2 domain-containing protein.
    
 0.947
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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