STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_130680Pectate lyase. (404 aa)    
Predicted Functional Partners:
CUMW_106170
Pectinesterase.
  
 
 0.855
CUMW_132990
Pectinesterase.
  
 
 0.853
CUMW_181970
Pectinesterase.
  
 
 0.851
CUMW_086410
Uncharacterized protein.
     
 0.845
CUMW_030020
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
     
 0.831
CUMW_085350
Pectinesterase.
   
 
 0.823
CUMW_156710
PMEI domain-containing protein; In the C-terminal section; belongs to the pectinesterase family.
   
 
 0.823
CUMW_030290
Pectinesterase.
   
 
 0.821
CUMW_203490
Pectinesterase.
   
 
 0.821
CUMW_010050
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
   
 
  0.818
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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