Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUMW_004800 | CUMW_061800 | A0A2H5MY34 | A0A2H5NNI3 | Ipi1_N domain-containing protein. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | 0.687 |
CUMW_004800 | CUMW_063510 | A0A2H5MY34 | A0A2H5NPJ8 | Ipi1_N domain-containing protein. | Uncharacterized protein. | 0.860 |
CUMW_004800 | CUMW_108170 | A0A2H5MY34 | A0A2H5P6C6 | Ipi1_N domain-containing protein. | RNB domain-containing protein. | 0.687 |
CUMW_004800 | CUMW_125370 | A0A2H5MY34 | A0A2H5PD39 | Ipi1_N domain-containing protein. | Exonuclease domain-containing protein. | 0.798 |
CUMW_004800 | CUMW_138760 | A0A2H5MY34 | A0A2H5PI58 | Ipi1_N domain-containing protein. | Exonuclease domain-containing protein. | 0.798 |
CUMW_004800 | CUMW_194430 | A0A2H5MY34 | A0A2H5Q4E5 | Ipi1_N domain-containing protein. | Uncharacterized protein; Belongs to the RNR ribonuclease family. | 0.687 |
CUMW_032830 | CUMW_113050 | A0A2H5NCM1 | A0A2H5P8C7 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.683 |
CUMW_032830 | CUMW_125370 | A0A2H5NCM1 | A0A2H5PD39 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Exonuclease domain-containing protein. | 0.952 |
CUMW_032830 | CUMW_138760 | A0A2H5NCM1 | A0A2H5PI58 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Exonuclease domain-containing protein. | 0.952 |
CUMW_041950 | CUMW_113050 | A0A2H5NGU3 | A0A2H5P8C7 | Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.450 |
CUMW_041950 | CUMW_125370 | A0A2H5NGU3 | A0A2H5PD39 | Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Exonuclease domain-containing protein. | 0.786 |
CUMW_041950 | CUMW_138760 | A0A2H5NGU3 | A0A2H5PI58 | Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Exonuclease domain-containing protein. | 0.786 |
CUMW_061800 | CUMW_004800 | A0A2H5NNI3 | A0A2H5MY34 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | Ipi1_N domain-containing protein. | 0.687 |
CUMW_061800 | CUMW_125370 | A0A2H5NNI3 | A0A2H5PD39 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | Exonuclease domain-containing protein. | 0.785 |
CUMW_061800 | CUMW_129790 | A0A2H5NNI3 | A0A2H5PER1 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | Exonuclease domain-containing protein. | 0.479 |
CUMW_061800 | CUMW_138760 | A0A2H5NNI3 | A0A2H5PI58 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | Exonuclease domain-containing protein. | 0.783 |
CUMW_063510 | CUMW_004800 | A0A2H5NPJ8 | A0A2H5MY34 | Uncharacterized protein. | Ipi1_N domain-containing protein. | 0.860 |
CUMW_063510 | CUMW_113050 | A0A2H5NPJ8 | A0A2H5P8C7 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.446 |
CUMW_063510 | CUMW_125370 | A0A2H5NPJ8 | A0A2H5PD39 | Uncharacterized protein. | Exonuclease domain-containing protein. | 0.786 |
CUMW_063510 | CUMW_138760 | A0A2H5NPJ8 | A0A2H5PI58 | Uncharacterized protein. | Exonuclease domain-containing protein. | 0.786 |
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