STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_146460Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
CUMW_110580
Uncharacterized protein.
 
  
 0.943
CUMW_261900
4-hydroxyphenylpyruvate dioxygenase.
     
 0.909
CUMW_004080
Uncharacterized protein.
  
  
 
0.898
CUMW_161210
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.877
CUMW_153830
SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
     
 0.837
CUMW_166590
SAM_MPBQ_MSBQ_MT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
     
 0.837
CUMW_027090
Uncharacterized protein.
  
  
 
0.830
CUMW_163130
Uncharacterized protein.
  
 
 0.828
CUMW_257190
Uncharacterized protein.
  
  
 
0.824
CUMW_257180
Uncharacterized protein.
  
  
 
0.823
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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