STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_148760DNA_MISMATCH_REPAIR_2 domain-containing protein. (765 aa)    
Predicted Functional Partners:
CUMW_185130
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
   0.775
CUMW_002390
Uncharacterized protein.
   
   0.741
CUMW_020090
Uncharacterized protein.
    
   0.741
CUMW_174020
Uncharacterized protein.
    
   0.741
CUMW_075470
Uncharacterized protein.
 
 
 0.725
CUMW_057550
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 
0.719
CUMW_193400
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 
0.719
CUMW_082310
Uncharacterized protein.
   
 
 0.713
CUMW_089490
Uncharacterized protein.
   
 
 0.713
CUMW_056580
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 
0.710
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.