STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_153280V-SNARE coiled-coil homology domain-containing protein. (72 aa)    
Predicted Functional Partners:
CUMW_245170
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.811
CUMW_024460
t-SNARE coiled-coil homology domain-containing protein.
   
 0.798
CUMW_168210
t-SNARE coiled-coil homology domain-containing protein.
   
 0.798
CUMW_168200
Uncharacterized protein.
    
 0.795
CUMW_138620
Uncharacterized protein.
    
 
 0.776
CUMW_272780
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.762
CUMW_079040
YqaJ domain-containing protein.
   
 0.762
CUMW_211150
t-SNARE coiled-coil homology domain-containing protein.
   
 0.762
CUMW_215830
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.762
CUMW_128830
Arf-GAP domain-containing protein.
    
 0.704
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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