STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_184840Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
CUMW_164580
Epimerase domain-containing protein.
   
 
 0.664
CUMW_217260
Hydrolase_4 domain-containing protein.
   
 
 0.618
CUMW_088770
Hydrolase_4 domain-containing protein.
     
 0.594
CUMW_078180
Hydrolase_4 domain-containing protein.
     
 0.590
CUMW_105190
Hydrolase_4 domain-containing protein.
     
 0.588
CUMW_250120
PKS_ER domain-containing protein.
   
 
 0.587
CUMW_008510
Uncharacterized protein.
  
  
  0.584
CUMW_235640
Uncharacterized protein.
     
 0.580
CUMW_026720
Uncharacterized protein.
   
 
 0.578
CUMW_055750
Hydrolase_4 domain-containing protein.
     
 0.576
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.