STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_18645040S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (261 aa)    
Predicted Functional Partners:
CUMW_258790
Uncharacterized protein.
   
  
 0.999
CUMW_201300
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.998
CUMW_092830
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.997
CUMW_164600
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.996
CUMW_273290
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.993
CUMW_281400
Uncharacterized protein.
   
 0.993
CUMW_004090
Uncharacterized protein.
   
 0.993
CUMW_005120
Uncharacterized protein.
   
 0.993
CUMW_030640
Uncharacterized protein.
   
 0.993
CUMW_038880
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.993
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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