STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_186520Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
CUMW_079070
HORMA domain-containing protein.
   
 0.993
CUMW_222800
Uncharacterized protein.
   
 0.985
CUMW_167980
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.975
CUMW_261920
ANAPC5 domain-containing protein.
    
 0.973
CUMW_051990
APC1_C domain-containing protein.
   
 0.972
CUMW_011050
WD_REPEATS_REGION domain-containing protein.
    
 0.971
CUMW_023890
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.970
CUMW_102390
Uncharacterized protein.
   
 0.964
CUMW_019730
Uncharacterized protein.
    
 0.949
CUMW_024240
WD_REPEATS_REGION domain-containing protein.
   
 0.943
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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