STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_196270Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
CUMW_274210
Uncharacterized protein.
  
     0.544
CUMW_065160
AAI domain-containing protein.
  
     0.512
CUMW_065170
AAI domain-containing protein.
  
     0.506
CUMW_113210
Uncharacterized protein.
  
     0.502
CUMW_247330
Uncharacterized protein.
  
     0.501
CUMW_285830
Uncharacterized protein.
  
     0.498
CUMW_216790
Uncharacterized protein.
  
     0.497
CUMW_259470
Uncharacterized protein.
  
     0.494
CUMW_101110
Uncharacterized protein.
  
     0.492
CUMW_146980
SAM domain-containing protein.
  
     0.485
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.