STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_200050TFIIS central domain-containing protein. (1131 aa)    
Predicted Functional Partners:
CUMW_160720
RPOLD domain-containing protein.
    
  0.877
CUMW_018120
TFIIS-type domain-containing protein.
    
 0.865
CUMW_026030
RNA_pol_L_2 domain-containing protein.
    
 0.856
CUMW_021430
Uncharacterized protein.
    
  0.854
CUMW_246940
RPOL4c domain-containing protein.
    
  0.854
CUMW_120350
Uncharacterized protein.
    
  0.839
CUMW_181600
Uncharacterized protein.
    
  0.839
CUMW_144790
Sister chromatid cohesion protein.
   
  
 0.830
CUMW_282400
HECT domain-containing protein.
   
    0.748
CUMW_093540
HECT domain-containing protein.
   
    0.748
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.