STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_208030Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (91 aa)    
Predicted Functional Partners:
CUMW_257320
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.600
CUMW_257100
Uncharacterized protein.
  
 
   0.573
CUMW_007250
Alpha-L-AF_C domain-containing protein.
     
 0.563
CUMW_228710
Fn3_like domain-containing protein.
    
  0.559
CUMW_047740
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
  
 
  0.531
CUMW_132600
Uncharacterized protein.
  
 
   0.530
CUMW_188360
Uncharacterized protein.
  
     0.526
CUMW_182500
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
  
     0.522
CUMW_237740
Methyltransferase.
  
 
  0.522
CUMW_180090
Uncharacterized protein.
  
     0.521
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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