STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_208050F-box domain-containing protein. (349 aa)    
Predicted Functional Partners:
CUMW_277470
Uncharacterized protein.
  
     0.525
CUMW_105650
Uncharacterized protein.
  
     0.516
CUMW_081170
Uncharacterized protein.
  
     0.506
CUMW_289440
U-box domain-containing protein.
  
     0.504
CUMW_144650
Phytocyanin domain-containing protein.
  
     0.499
CUMW_275030
OVATE domain-containing protein.
  
     0.495
CUMW_185960
OVATE domain-containing protein.
  
     0.491
CUMW_121690
Uncharacterized protein.
  
     0.482
CUMW_070190
Uncharacterized protein.
  
     0.481
CUMW_022780
Uncharacterized protein.
  
     0.476
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.