STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_212870Peptidase_M16_M domain-containing protein. (105 aa)    
Predicted Functional Partners:
CUMW_021390
Ubiquitin-like domain-containing protein.
    
  0.688
CUMW_085520
Ribosomal_S27 domain-containing protein.
    
  0.688
CUMW_188540
Ribosomal_S27 domain-containing protein.
    
  0.688
CUMW_252530
Ubiquitin-like domain-containing protein.
    
  0.688
CUMW_077610
Uncharacterized protein; Belongs to the TPP enzyme family.
     
 0.604
CUMW_054000
Mitochondrial Rho GTPase.
   
 
  0.593
CUMW_199440
Mitochondrial Rho GTPase.
   
 
  0.593
CUMW_170230
Reticulon-like protein.
  
     0.438
CUMW_010140
Uncharacterized protein.
    
  0.435
CUMW_043350
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.435
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.