STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_216350SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (203 aa)    
Predicted Functional Partners:
CUMW_010450
Uncharacterized protein.
   
  
 0.579
CUMW_150910
Uncharacterized protein; Belongs to the small heat shock protein (HSP20) family.
  
   
 0.567
CUMW_246570
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
  
0.506
CUMW_132640
Uncharacterized protein.
   
 
 0.473
CUMW_157760
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
  
  
0.472
CUMW_185680
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
   
 
 0.470
CUMW_193420
HTH cro/C1-type domain-containing protein.
   
  
 0.468
CUMW_283020
AAA domain-containing protein.
  
 
 0.466
CUMW_075180
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.466
CUMW_088320
ATPase_AAA_core domain-containing protein.
  
 
 0.466
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.