STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_236710Usp domain-containing protein. (236 aa)    
Predicted Functional Partners:
CUMW_113210
Uncharacterized protein.
  
     0.494
CUMW_035010
Plastocyanin-like domain-containing protein.
  
     0.493
CUMW_182890
Uncharacterized protein.
  
     0.489
CUMW_268800
Uncharacterized protein.
  
     0.486
CUMW_217490
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.481
CUMW_146980
SAM domain-containing protein.
  
     0.479
CUMW_146990
SAM domain-containing protein.
  
     0.479
CUMW_268610
Uncharacterized protein.
  
     0.476
CUMW_274210
Uncharacterized protein.
  
     0.474
CUMW_179660
COesterase domain-containing protein.
  
     0.468
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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