STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_249800Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
CUMW_252020
Uncharacterized protein.
     
 0.846
CUMW_201500
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.829
CUMW_194800
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
    
 0.827
CUMW_000170
Uncharacterized protein.
   
 
 0.824
CUMW_154180
Uncharacterized protein.
  
  
 
0.823
CUMW_074020
Staygreen domain-containing protein.
     
 0.818
CUMW_202500
Uncharacterized protein.
    
 
 0.788
CUMW_235660
ASCH domain-containing protein.
     
 0.771
CUMW_062200
Rieske domain-containing protein.
     
 0.758
CUMW_062190
Rieske domain-containing protein.
     
 0.758
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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