STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_251030Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
CUMW_158770
TPX2 domain-containing protein.
   
 0.936
CUMW_180280
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.936
CUMW_151040
CP-type G domain-containing protein.
     
 0.893
CUMW_025280
Uncharacterized protein.
    
 
 0.830
CUMW_123280
G domain-containing protein.
     
 0.748
CUMW_038290
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.627
CUMW_181370
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.627
CUMW_216960
CP-type G domain-containing protein.
     
 0.533
CUMW_049670
CP-type G domain-containing protein.
     
 0.506
CUMW_053920
G domain-containing protein.
     
 0.506
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.