STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_252250RF_PROK_I domain-containing protein. (158 aa)    
Predicted Functional Partners:
CUMW_104610
MTS domain-containing protein.
  
 
 0.802
CUMW_152240
MTS domain-containing protein.
  
 
 0.802
CUMW_185130
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.783
CUMW_002390
Uncharacterized protein.
  
 
 0.776
CUMW_174020
Uncharacterized protein.
  
 
 0.768
CUMW_201300
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.762
CUMW_071590
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.752
CUMW_020090
Uncharacterized protein.
   
 
 0.738
CUMW_147190
Thymidine kinase.
  
  
 0.721
CUMW_141760
Ribosomal_TL5_C domain-containing protein.
  
 
 0.695
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.