STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_255560PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (406 aa)    
Predicted Functional Partners:
CUMW_031570
PKS_AT domain-containing protein.
 
 0.989
CUMW_074920
Uncharacterized protein.
 
 
 0.988
CUMW_282160
FabA domain-containing protein.
 
 0.941
CUMW_079180
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.923
CUMW_283840
FabA domain-containing protein.
  
 0.894
CUMW_249970
Uncharacterized protein.
  
 0.894
CUMW_035080
PKS_ER domain-containing protein.
   
 
 0.878
CUMW_127190
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
     
 0.873
CUMW_061090
Uncharacterized protein.
  
 
 0.869
CUMW_170540
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
     
 0.867
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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