STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_265940Uncharacterized protein. (293 aa)    
Predicted Functional Partners:
CUMW_091580
Importin N-terminal domain-containing protein.
   
 0.843
CUMW_043650
Importin N-terminal domain-containing protein.
   
 0.712
CUMW_238580
Importin N-terminal domain-containing protein.
   
 0.712
CUMW_000480
Importin N-terminal domain-containing protein.
   
 0.707
CUMW_065140
MIF4G domain-containing protein.
   
 
 0.683
CUMW_209170
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.658
CUMW_241310
Nuclear cap-binding protein subunit 2.
    
 
 0.655
CUMW_134610
AAA_16 domain-containing protein.
   
 
  0.587
CUMW_072940
ORC_WH_C domain-containing protein.
   
 
  0.573
CUMW_206690
RanBD1 domain-containing protein.
   
 
 0.529
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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