Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUMW_005540 | CUMW_025680 | A0A2H5MYI8 | A0A2H5NAC3 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.992 |
CUMW_005540 | CUMW_049730 | A0A2H5MYI8 | A0A2H5NIZ0 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.995 |
CUMW_005540 | CUMW_054350 | A0A2H5MYI8 | A0A2H5NKP7 | Small nuclear ribonucleoprotein G. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.994 |
CUMW_005540 | CUMW_055740 | A0A2H5MYI8 | A0A2H5NL99 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
CUMW_005540 | CUMW_172790 | A0A2H5MYI8 | A0A2H5PW26 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
CUMW_005540 | CUMW_250260 | A0A2H5MYI8 | A0A2H5QPR7 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.995 |
CUMW_005540 | CUMW_271240 | A0A2H5MYI8 | A0A2H5QXJ7 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.992 |
CUMW_005540 | LSM4 | A0A2H5MYI8 | A0A2H5NL83 | Small nuclear ribonucleoprotein G. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.961 |
CUMW_005540 | LSM4-2 | A0A2H5MYI8 | A0A2H5PW68 | Small nuclear ribonucleoprotein G. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.961 |
CUMW_005540 | LSM8 | A0A2H5MYI8 | A0A2H5QU36 | Small nuclear ribonucleoprotein G. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
CUMW_025680 | CUMW_005540 | A0A2H5NAC3 | A0A2H5MYI8 | Sm domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.992 |
CUMW_025680 | CUMW_049730 | A0A2H5NAC3 | A0A2H5NIZ0 | Sm domain-containing protein. | Uncharacterized protein. | 0.999 |
CUMW_025680 | CUMW_054350 | A0A2H5NAC3 | A0A2H5NKP7 | Sm domain-containing protein. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.999 |
CUMW_025680 | CUMW_055740 | A0A2H5NAC3 | A0A2H5NL99 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.994 |
CUMW_025680 | CUMW_172790 | A0A2H5NAC3 | A0A2H5PW26 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D2. | 0.994 |
CUMW_025680 | CUMW_250260 | A0A2H5NAC3 | A0A2H5QPR7 | Sm domain-containing protein. | Sm domain-containing protein. | 0.999 |
CUMW_025680 | CUMW_271240 | A0A2H5NAC3 | A0A2H5QXJ7 | Sm domain-containing protein. | Uncharacterized protein. | 0.994 |
CUMW_025680 | LSM4 | A0A2H5NAC3 | A0A2H5NL83 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.995 |
CUMW_025680 | LSM4-2 | A0A2H5NAC3 | A0A2H5PW68 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.995 |
CUMW_025680 | LSM8 | A0A2H5NAC3 | A0A2H5QU36 | Sm domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.996 |
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