STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_271970MATH domain-containing protein. (120 aa)    
Predicted Functional Partners:
CUMW_157120
Shugoshin_C domain-containing protein.
  
  0.579
CUMW_049930
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.566
CUMW_127470
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.566
CUMW_119880
Uncharacterized protein.
  
 
   0.524
CUMW_142030
Uncharacterized protein.
  
     0.504
CUMW_179970
Uncharacterized protein.
  
     0.494
CUMW_279100
Uncharacterized protein.
  
 
   0.493
CUMW_165930
Uncharacterized protein.
  
     0.488
CUMW_012260
Uncharacterized protein.
  
     0.476
CUMW_094500
Uncharacterized protein.
  
 
   0.467
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.