STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM36491.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (421 aa)    
Predicted Functional Partners:
SHN39706.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.994
SHN39711.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.992
SHM28656.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.988
SHM28695.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.982
SHN39702.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.975
SHN38761.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.973
SHM28601.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.970
SHN38779.1
Sorbitol ABC transporter ATP-binding protein.
 
 0.969
SHN38755.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.963
SHM28523.1
Glucose-binding protein.
  
  
 
0.716
Your Current Organism:
Duganella sacchari
NCBI taxonomy Id: 551987
Other names: D. sacchari, Duganella sacchari Madhaiyan et al. 2013, Duganella sp. Sac-22, KCTC 22381, NCIMB 14475, strain Sac-22
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