STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN18022.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
SHN17949.1
Flagellar basal-body rod modification protein FlgD.
       0.773
SHN17962.1
Hypothetical protein.
       0.773
SHN17978.1
Hypothetical protein.
       0.773
SHN17992.1
Type III secretion system ATPase, FliI/YscN.
       0.773
SHN18008.1
Flagellar assembly protein FliH.
       0.773
SHN18039.1
Flagellar M-ring protein FliF.
       0.773
fliE-3
Flagellar hook-basal body complex protein FliE.
       0.664
SHN18070.1
Flagellar basal-body rod protein FlgC.
       0.664
SHN17915.1
Type III flagellar switch regulator (C-ring) FliN C-term.
       0.661
SHN17929.1
Flagellar hook protein FlgE.
       0.661
Your Current Organism:
Duganella sacchari
NCBI taxonomy Id: 551987
Other names: D. sacchari, Duganella sacchari Madhaiyan et al. 2013, Duganella sp. Sac-22, KCTC 22381, NCIMB 14475, strain Sac-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.