Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM34290.1 | SHN25039.1 | SAMN05192549_101350 | SAMN05192549_106163 | Serine/threonine protein phosphatase PrpC. | D-threo-aldose 1-dehydrogenase. | 0.715 |
SHM34290.1 | SHN33900.1 | SAMN05192549_101350 | SAMN05192549_107450 | Serine/threonine protein phosphatase PrpC. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.729 |
SHM34290.1 | SHN33911.1 | SAMN05192549_101350 | SAMN05192549_107451 | Serine/threonine protein phosphatase PrpC. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.729 |
SHM34290.1 | SHN42395.1 | SAMN05192549_101350 | SAMN05192549_11445 | Serine/threonine protein phosphatase PrpC. | Peptidylprolyl isomerase. | 0.729 |
SHM34290.1 | SHN43564.1 | SAMN05192549_101350 | SAMN05192549_11770 | Serine/threonine protein phosphatase PrpC. | Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.856 |
SHM34290.1 | aqpZ | SAMN05192549_101350 | SAMN05192549_110162 | Serine/threonine protein phosphatase PrpC. | Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.856 |
SHM34290.1 | ndk | SAMN05192549_101350 | SAMN05192549_101336 | Serine/threonine protein phosphatase PrpC. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.876 |
SHM47979.1 | SHN25039.1 | SAMN05192549_101691 | SAMN05192549_106163 | Protein phosphatase. | D-threo-aldose 1-dehydrogenase. | 0.715 |
SHM47979.1 | SHN33900.1 | SAMN05192549_101691 | SAMN05192549_107450 | Protein phosphatase. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.729 |
SHM47979.1 | SHN33911.1 | SAMN05192549_101691 | SAMN05192549_107451 | Protein phosphatase. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.729 |
SHM47979.1 | SHN42395.1 | SAMN05192549_101691 | SAMN05192549_11445 | Protein phosphatase. | Peptidylprolyl isomerase. | 0.729 |
SHM47979.1 | SHN43564.1 | SAMN05192549_101691 | SAMN05192549_11770 | Protein phosphatase. | Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.856 |
SHM47979.1 | aqpZ | SAMN05192549_101691 | SAMN05192549_110162 | Protein phosphatase. | Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.856 |
SHM47979.1 | ndk | SAMN05192549_101691 | SAMN05192549_101336 | Protein phosphatase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.876 |
SHN25039.1 | SHM34290.1 | SAMN05192549_106163 | SAMN05192549_101350 | D-threo-aldose 1-dehydrogenase. | Serine/threonine protein phosphatase PrpC. | 0.715 |
SHN25039.1 | SHM47979.1 | SAMN05192549_106163 | SAMN05192549_101691 | D-threo-aldose 1-dehydrogenase. | Protein phosphatase. | 0.715 |
SHN25039.1 | SHN25046.1 | SAMN05192549_106163 | SAMN05192549_106164 | D-threo-aldose 1-dehydrogenase. | Aldo/keto reductase. | 0.949 |
SHN25039.1 | SHN33900.1 | SAMN05192549_106163 | SAMN05192549_107450 | D-threo-aldose 1-dehydrogenase. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.717 |
SHN25039.1 | SHN33911.1 | SAMN05192549_106163 | SAMN05192549_107451 | D-threo-aldose 1-dehydrogenase. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.717 |
SHN25039.1 | SHN42395.1 | SAMN05192549_106163 | SAMN05192549_11445 | D-threo-aldose 1-dehydrogenase. | Peptidylprolyl isomerase. | 0.717 |
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