Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
SHN26365.1Non-heme chloroperoxidase. (319 aa)    
Predicted Functional Partners:
SHN13198.1
AMP-binding enzyme.
   
 0.968
SHM70506.1
Polyketide synthase PksJ.
  
 0.921
SHM78841.1
Amino acid adenylation domain-containing protein.
  
 0.921
SHN13175.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 0.899
SHM78877.1
Amino acid adenylation domain-containing protein.
   
 0.763
SHM78912.1
Amino acid adenylation domain-containing protein.
   
 0.763
SHM77759.1
Amino acid adenylation domain-containing protein.
   
 0.685
SHM77796.1
Amino acid adenylation domain-containing protein.
   
 0.643
SHN26358.1
Multi-sensor hybrid histidine kinase.
   
 
 0.635
SHN13187.1
AMP-binding enzyme.
   
 0.633
Your Current Organism:
Duganella sacchari
NCBI taxonomy Id: 551987
Other names: D. sacchari, Duganella sacchari Madhaiyan et al. 2013, Duganella sp. Sac-22, KCTC 22381, NCIMB 14475, strain Sac-22
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