STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN40162.1SH3 domain-containing protein. (159 aa)    
Predicted Functional Partners:
SHN40153.1
Serine/threonine protein kinase.
       0.773
SHN40156.1
Cell division protein FtsW; Belongs to the SEDS family.
       0.773
SHN40159.1
Hypothetical protein.
       0.773
SHN40165.1
Serine/threonine protein phosphatase PrpC.
       0.773
SHN40145.1
Hypothetical protein.
       0.534
SHN40148.1
Hypothetical protein.
       0.534
SHN40150.1
Glyoxylase, beta-lactamase superfamily II.
       0.534
SHN40169.1
FHA domain-containing protein.
       0.519
Your Current Organism:
Duganella sacchari
NCBI taxonomy Id: 551987
Other names: D. sacchari, Duganella sacchari Madhaiyan et al. 2013, Duganella sp. Sac-22, KCTC 22381, NCIMB 14475, strain Sac-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.