STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI48082.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SDI48115.1
Methyltransferase domain-containing protein.
  
    0.648
SDI96196.1
Protein involved in gliding motility GldN.
  
     0.581
SDI48049.1
Lipoprotein-releasing system permease protein.
       0.539
SDJ58147.1
Protein involved in gliding motility GldJ.
  
     0.504
SDI51327.1
Hypothetical protein.
  
     0.502
mvaK
Mevalonate kinase.
  
     0.483
gldD
Protein involved in gliding motility GldD.
 
     0.462
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.459
SDI68720.1
Protein involved in gliding motility GldH.
  
     0.423
SDI68381.1
Hypothetical protein.
 
     0.411
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.