close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
queEOrganic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (210 aa)    
Predicted Functional Partners:
SDI80376.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
 
 
 0.993
ygcM
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
 
 
 0.979
SDJ00219.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
  
 
 0.900
SDJ65996.1
Hypothetical protein.
  
 
 0.856
SDJ00180.1
Anaerobic ribonucleoside-triphosphate reductase.
  
 
 0.793
SDI82481.1
Acyl-protein synthetase, LuxE.
  
     0.568
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.496
SDI48194.1
Tetratricopeptide repeat-containing protein.
       0.492
SDI48227.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
       0.469
purF
Amidophosphoribosyltransferase.
  
 
 0.437
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.