STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI50200.1CarboxypepD_reg-like domain-containing protein. (829 aa)    
Predicted Functional Partners:
SDI85106.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
     0.687
SDJ66820.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.682
pdhB
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
       0.681
SDI88870.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.676
SDJ05141.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.657
SDJ01193.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.638
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.636
SDK03583.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.622
SDI89418.1
Hypothetical protein.
  
     0.600
SDJ00981.1
Hypothetical protein.
  
     0.599
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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