STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI50941.1Penicillin-binding protein 2. (646 aa)    
Predicted Functional Partners:
rodA
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.981
mreC
Rod shape-determining protein MreC.
 
 
 0.963
mreB
Rod shape-determining protein MreB.
 
 
 
 0.939
ftsI
Cell division protein FtsI (penicillin-binding protein 3).
  
  
 
0.922
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.870
SDI94167.1
Cell division protein FtsQ.
 
 
 0.861
SDI50912.1
Rod shape-determining protein MreD.
 
     0.851
mrcA
Penicillin-binding protein 1A.
  
 
 0.817
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.686
mltD
Membrane-bound lytic murein transglycosylase D.
 
 
 0.647
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.