STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI52633.14-hydroxybenzoate polyprenyltransferase. (318 aa)    
Predicted Functional Partners:
SDI93419.1
Octaprenyl-diphosphate synthase; Manually curated; Belongs to the FPP/GGPP synthase family.
 
 
 0.917
SDJ47195.1
Hypothetical protein.
    
 0.804
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.800
mvaK
Mevalonate kinase.
 
   
 0.785
ubiA
4-hydroxybenzoate polyprenyltransferase.
  
  
 
0.769
pcrB
Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
 
  
 0.764
gldI
Protein involved in gliding motility GldI.
  
     0.655
gldB
Protein involved in gliding motility GldB.
  
     0.642
SDI77268.1
Protein of unknown function.
  
     0.630
SDJ83774.1
Protein of unknown function.
  
     0.628
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (18%) [HD]