STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI53683.1Pectinesterase. (325 aa)    
Predicted Functional Partners:
SDI97754.1
Pectinesterase.
 
  
  0.823
rhgT
Lysophospholipase L1.
 
  
  0.780
SDI72561.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.701
SDI53863.1
Lysophospholipase L1.
 
  
  0.700
SDJ29197.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.692
SDI97608.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.690
SDJ42139.1
Lysophospholipase L1.
 
  
  0.689
SDI57152.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.682
SDI97689.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.681
SDJ28229.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.676
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (16%) [HD]