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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcdHglutaryl-CoA dehydrogenase. (392 aa)    
Predicted Functional Partners:
SDK02207.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.984
etfA
Electron transfer flavoprotein alpha subunit apoprotein.
 0.977
SDI50265.1
Electron transfer flavoprotein beta subunit.
 
 
 0.960
SDK02167.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.946
crt
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.937
sucB
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
 0.909
bfmBB
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
   
 0.909
SDJ40564.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.904
lpdA1
Dihydrolipoamide dehydrogenase.
   
 
 0.897
lpdA2
Dihydrolipoamide dehydrogenase.
   
 
 0.897
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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