STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI58762.1Uncharacterized iron-regulated membrane protein. (515 aa)    
Predicted Functional Partners:
SDI58725.1
Hypothetical protein.
 
     0.954
SDI58686.1
Hypothetical protein.
 
     0.947
SDI58649.1
Iron complex outermembrane recepter protein.
 
  
 0.825
SDI49493.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.671
SDJ90788.1
Glycosyl hydrolase-like 10.
  
     0.580
SDJ33595.1
Glycosyl hydrolases family 43.
  
     0.531
SDI53414.1
Protein of unknown function, DUF608.
  
     0.509
SDI56879.1
Glycosyl hydrolases family 43.
  
     0.496
SDI86615.1
Ig-like domain (group 4).
  
     0.495
SDJ06673.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
  
  0.487
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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