STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI61295.1Por secretion system C-terminal sorting domain-containing protein. (892 aa)    
Predicted Functional Partners:
SDJ90762.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.870
SDI69845.1
Hypothetical protein.
    
 
 0.764
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.746
SDK02805.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.668
SDJ89050.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.631
SDJ66853.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
  0.570
SDI64722.1
Putative collagen-binding domain of a collagenase.
    
 0.533
udk
Uridine kinase.
    
  0.528
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
     
 0.523
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.520
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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