STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmSGlutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (614 aa)    
Predicted Functional Partners:
gltA
Glutamate synthase (NADH) large subunit.
   
 0.949
carB
Carbamoyl-phosphate synthase large subunit.
   
 0.912
purF
Amidophosphoribosyltransferase.
    
 0.908
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
    
  0.905
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.903
glnII
Glutamine synthetase.
  
 
 0.902
manA
Mannose-6-phosphate isomerase, type 1.
     
 0.899
gltD
Glutamate synthase (NADH) small subunit.
    
 0.897
SDI61996.1
Protein of unknown function.
       0.830
SDI62049.1
Starch synthase.
       0.830
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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