STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI62351.1Peptidase family M28. (803 aa)    
Predicted Functional Partners:
SDI62391.1
Hypothetical protein.
       0.740
SDI62478.1
Predicted amidohydrolase.
  
    0.707
yfiT
DinB superfamily protein.
       0.705
SDI88574.1
Hypothetical protein.
  
     0.666
SDI93197.1
Hypothetical protein.
  
     0.650
SDJ44557.1
Hypothetical protein.
  
 
  0.631
SDJ92366.1
Hypothetical protein.
  
     0.604
SDK07654.1
Putative MetA-pathway of phenol degradation.
  
     0.596
SDJ63987.1
Hypothetical protein.
  
     0.576
SDJ66541.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.